Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 GNAQP1-201ENST00000444815 1067 ntBASIC17.04■□□□□ 0.32
PHOX2BQ99453 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 AL138828.2-201ENST00000615812 383 ntBASIC17.04■□□□□ 0.32
PHOX2BQ99453 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 AC009407.1-201ENST00000568958 598 ntBASIC17.03■□□□□ 0.32
PHOX2BQ99453 RN7SL190P-201ENST00000582519 257 ntBASIC17.03■□□□□ 0.32
PHOX2BQ99453 AC244093.1-201ENST00000610837 814 ntBASIC17.03■□□□□ 0.32
PHOX2BQ99453 AC133552.6-201ENST00000613406 534 ntBASIC17.03■□□□□ 0.32
PHOX2BQ99453 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHOX2BQ99453 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PHOX2BQ99453 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 MYCLP1-201ENST00000372451 1075 ntBASIC17.02■□□□□ 0.32
PHOX2BQ99453 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 MIR1908-201ENST00000410394 80 ntBASIC17.02■□□□□ 0.32
PHOX2BQ99453 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 AC011495.1-201ENST00000498085 584 ntBASIC17.02■□□□□ 0.32
PHOX2BQ99453 STK19B-204ENST00000512515 211 ntBASIC17.02■□□□□ 0.32
PHOX2BQ99453 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHOX2BQ99453 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.02■□□□□ 0.32
PHOX2BQ99453 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PHOX2BQ99453 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PHOX2BQ99453 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.02■□□□□ 0.31
PHOX2BQ99453 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHOX2BQ99453 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.02■□□□□ 0.31
PHOX2BQ99453 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
PHOX2BQ99453 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHOX2BQ99453 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms