Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 MIR4751-201ENST00000578027 74 ntBASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 ACTL9-202ENST00000612068 1252 ntBASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 FAM185BP-201ENST00000443595 716 ntBASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 CYP2A7P1-201ENST00000595391 815 ntBASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSPG4P5Q96PW8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 FDX1P1-201ENST00000449115 551 ntBASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CSPG4P5Q96PW8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms