Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C9orf85Q96MD7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
C9orf85Q96MD7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
C9orf85Q96MD7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.25□□□□□ -0.45
C9orf85Q96MD7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
C9orf85Q96MD7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.25□□□□□ -0.45
C9orf85Q96MD7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 TOP3BP1-201ENST00000420768 1380 ntBASIC12.24□□□□□ -0.45
C9orf85Q96MD7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 AP001269.4-201ENST00000609611 512 ntBASIC12.24□□□□□ -0.45
C9orf85Q96MD7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 PCDHA1-201ENST00000378133 2726 ntBASIC12.24□□□□□ -0.45
C9orf85Q96MD7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C9orf85Q96MD7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 AC046158.3-201ENST00000624947 2558 ntBASIC12.23□□□□□ -0.45
C9orf85Q96MD7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 ATP5G2P1-201ENST00000433580 426 ntBASIC12.23□□□□□ -0.45
C9orf85Q96MD7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 KRT16P4-201ENST00000453883 522 ntBASIC12.23□□□□□ -0.45
C9orf85Q96MD7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 AL022326.1-202ENST00000641533 845 ntBASIC12.23□□□□□ -0.45
C9orf85Q96MD7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 AC079328.2-201ENST00000561241 3354 ntBASIC12.23□□□□□ -0.45
C9orf85Q96MD7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms