Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 GK-202ENST00000378941 458 ntTSL 3 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 AL596325.1-201ENST00000563991 1082 ntBASIC21.99■■□□□ 1.11
NBPF4Q96M43 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 TUBB8P12-201ENST00000308911 1335 ntBASIC21.99■■□□□ 1.11
NBPF4Q96M43 TUBB7P-202ENST00000428444 1305 ntBASIC21.99■■□□□ 1.11
NBPF4Q96M43 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.99■■□□□ 1.11
NBPF4Q96M43 TUBB8P7-204ENST00000567960 1332 ntBASIC21.99■■□□□ 1.11
NBPF4Q96M43 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 AC068880.1-201ENST00000507289 2297 ntBASIC21.99■■□□□ 1.11
NBPF4Q96M43 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NBPF4Q96M43 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 PCDHB17P-201ENST00000539533 2393 ntBASIC21.98■■□□□ 1.11
NBPF4Q96M43 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 RN7SL828P-201ENST00000607615 303 ntBASIC21.98■■□□□ 1.11
NBPF4Q96M43 AL133215.2-201ENST00000609242 977 ntBASIC21.98■■□□□ 1.11
NBPF4Q96M43 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
NBPF4Q96M43 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NBPF4Q96M43 AC018470.1-201ENST00000624790 3129 ntBASIC21.98■■□□□ 1.11
NBPF4Q96M43 NOC2LP2-201ENST00000407594 1944 ntBASIC21.98■■□□□ 1.11
NBPF4Q96M43 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 AL035456.1-201ENST00000456064 1369 ntBASIC21.97■■□□□ 1.11
NBPF4Q96M43 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.97■■□□□ 1.11
NBPF4Q96M43 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NBPF4Q96M43 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.96■■□□□ 1.11
NBPF4Q96M43 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NBPF4Q96M43 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NBPF4Q96M43 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.96■■□□□ 1.11
NBPF4Q96M43 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NBPF4Q96M43 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NBPF4Q96M43 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NBPF4Q96M43 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NBPF4Q96M43 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NBPF4Q96M43 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NBPF4Q96M43 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.96■■□□□ 1.11
NBPF4Q96M43 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms