Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 AC027601.4-201ENST00000611259 610 ntBASIC17.44■□□□□ 0.38
IFT43Q96FT9 FAM197Y3-203ENST00000618346 717 ntBASIC17.44■□□□□ 0.38
IFT43Q96FT9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 NCF1C-201ENST00000438382 1427 ntBASIC17.44■□□□□ 0.38
IFT43Q96FT9 PCDHA1-201ENST00000378133 2726 ntBASIC17.44■□□□□ 0.38
IFT43Q96FT9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 EGFEM1P-202ENST00000431685 1563 ntBASIC17.44■□□□□ 0.38
IFT43Q96FT9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.44■□□□□ 0.38
IFT43Q96FT9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 DOC2GP-204ENST00000639052 2548 ntBASIC17.43■□□□□ 0.38
IFT43Q96FT9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 AC098831.1-202ENST00000438821 336 ntBASIC17.43■□□□□ 0.38
IFT43Q96FT9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IFT43Q96FT9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT43Q96FT9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 POLD2P1-201ENST00000511220 997 ntBASIC17.42■□□□□ 0.38
IFT43Q96FT9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 AC012640.2-201ENST00000561606 901 ntBASIC17.42■□□□□ 0.38
IFT43Q96FT9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 Z83851.2-201ENST00000609564 659 ntBASIC17.42■□□□□ 0.38
IFT43Q96FT9 AC139530.3-201ENST00000620344 690 ntBASIC17.42■□□□□ 0.38
IFT43Q96FT9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT43Q96FT9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT43Q96FT9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms