Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AC022211.2-201ENST00000585075 2527 ntBASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AC020916.1-201ENST00000587762 1774 ntBASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AL355306.1-201ENST00000415580 579 ntBASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AP006288.1-201ENST00000446065 395 ntBASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AC021097.1-201ENST00000607902 574 ntBASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 GPALPP1-207ENST00000611650 899 ntBASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AL161645.1-201ENST00000622716 1255 ntBASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AC078925.2-201ENST00000624013 1973 ntBASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ECHDC3Q96DC8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 AC211486.1-202ENST00000416371 468 ntBASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 CEND1P1-201ENST00000451006 455 ntBASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 AC004967.1-201ENST00000453589 447 ntBASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 AC211476.1-201ENST00000503899 468 ntBASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 AC134684.3-201ENST00000641758 218 ntBASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 AL603756.1-201ENST00000606511 2163 ntBASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ECHDC3Q96DC8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms