Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL355312.1-201ENST00000407115 2176 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 AC012317.2-201ENST00000623305 2251 ntBASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM43Q96BQ3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 AL021920.2-201ENST00000624828 1351 ntBASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM43Q96BQ3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 AC007389.4-201ENST00000454674 793 ntBASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 FRMD8P1-201ENST00000440433 1524 ntBASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM43Q96BQ3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 AC008735.3-201ENST00000596646 500 ntBASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 WFDC1-204ENST00000613603 549 ntBASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 MIR6787-201ENST00000616675 61 ntBASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM43Q96BQ3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms