Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC096633.1-201ENST00000422446 749 ntBASIC15.01□□□□□ -0.01
RFT1Q96AA3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFT1Q96AA3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RFT1Q96AA3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFT1Q96AA3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFT1Q96AA3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
RFT1Q96AA3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFT1Q96AA3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15□□□□□ -0.01
RFT1Q96AA3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15□□□□□ -0.01
RFT1Q96AA3 LINC01023-201ENST00000606054 436 ntBASIC15□□□□□ -0.01
RFT1Q96AA3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15□□□□□ -0.01
RFT1Q96AA3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15□□□□□ -0.01
RFT1Q96AA3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15□□□□□ -0.01
RFT1Q96AA3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15□□□□□ -0.01
RFT1Q96AA3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
RFT1Q96AA3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFT1Q96AA3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15□□□□□ -0.01
RFT1Q96AA3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15□□□□□ -0.01
RFT1Q96AA3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 SLC25A1P3-201ENST00000395415 828 ntBASIC14.99□□□□□ -0.01
RFT1Q96AA3 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.99□□□□□ -0.01
RFT1Q96AA3 AL671277.2-201ENST00000458060 996 ntBASIC14.99□□□□□ -0.01
RFT1Q96AA3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 AC109462.3-201ENST00000573934 613 ntBASIC14.99□□□□□ -0.01
RFT1Q96AA3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 AL136379.1-201ENST00000623471 2642 ntBASIC14.99□□□□□ -0.01
RFT1Q96AA3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms