Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 AP001269.4-201ENST00000609611 512 ntBASIC16.44■□□□□ 0.22
NCLNQ969V3 AL031008.1-201ENST00000619963 541 ntBASIC16.44■□□□□ 0.22
NCLNQ969V3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.44■□□□□ 0.22
NCLNQ969V3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
NCLNQ969V3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NCLNQ969V3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCLNQ969V3 AC008741.2-201ENST00000612792 3115 ntBASIC16.44■□□□□ 0.22
NCLNQ969V3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCLNQ969V3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCLNQ969V3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCLNQ969V3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCLNQ969V3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCLNQ969V3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCLNQ969V3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCLNQ969V3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCLNQ969V3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 ABCD1P5-201ENST00000445663 754 ntBASIC16.43■□□□□ 0.22
NCLNQ969V3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.43■□□□□ 0.22
NCLNQ969V3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
NCLNQ969V3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.43■□□□□ 0.22
NCLNQ969V3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.43■□□□□ 0.22
NCLNQ969V3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCLNQ969V3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.43■□□□□ 0.22
NCLNQ969V3 AL121912.1-201ENST00000603683 238 ntBASIC16.43■□□□□ 0.22
NCLNQ969V3 AC008608.2-201ENST00000606089 416 ntBASIC16.43■□□□□ 0.22
NCLNQ969V3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.43■□□□□ 0.22
NCLNQ969V3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCLNQ969V3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.43■□□□□ 0.22
NCLNQ969V3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCLNQ969V3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NCLNQ969V3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.43■□□□□ 0.22
NCLNQ969V3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCLNQ969V3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
NCLNQ969V3 AC007326.2-201ENST00000624224 7579 ntBASIC16.42■□□□□ 0.22
NCLNQ969V3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NCLNQ969V3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NCLNQ969V3 AC093525.9-201ENST00000624961 1746 ntBASIC16.42■□□□□ 0.22
NCLNQ969V3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
NCLNQ969V3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.42■□□□□ 0.22
NCLNQ969V3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.42■□□□□ 0.22
NCLNQ969V3 AC103564.2-201ENST00000432853 1299 ntBASIC16.42■□□□□ 0.22
NCLNQ969V3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.42■□□□□ 0.22
NCLNQ969V3 AC106795.1-205ENST00000512851 1056 ntBASIC16.42■□□□□ 0.22
NCLNQ969V3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
NCLNQ969V3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.42■□□□□ 0.22
NCLNQ969V3 MTDHP3-201ENST00000594186 672 ntBASIC16.42■□□□□ 0.22
NCLNQ969V3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NCLNQ969V3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.42■□□□□ 0.22
NCLNQ969V3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
NCLNQ969V3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.42■□□□□ 0.22
NCLNQ969V3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.42■□□□□ 0.22
NCLNQ969V3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NCLNQ969V3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.42■□□□□ 0.22
NCLNQ969V3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NCLNQ969V3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NCLNQ969V3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 AL603756.1-201ENST00000606511 2163 ntBASIC16.41■□□□□ 0.22
NCLNQ969V3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.41■□□□□ 0.22
NCLNQ969V3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.41■□□□□ 0.22
NCLNQ969V3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms