Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USP6NLQ92738 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USP6NLQ92738 ARSEP1-201ENST00000420443 635 ntBASIC18.97■□□□□ 0.63
USP6NLQ92738 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6NLQ92738 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.97■□□□□ 0.63
USP6NLQ92738 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.97■□□□□ 0.63
USP6NLQ92738 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6NLQ92738 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP6NLQ92738 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.97■□□□□ 0.63
USP6NLQ92738 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.97■□□□□ 0.63
USP6NLQ92738 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.97■□□□□ 0.63
USP6NLQ92738 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP6NLQ92738 TEX28P1-201ENST00000613479 1221 ntBASIC18.97■□□□□ 0.63
USP6NLQ92738 TEX28P2-201ENST00000617764 1221 ntBASIC18.97■□□□□ 0.63
USP6NLQ92738 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.97■□□□□ 0.63
USP6NLQ92738 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6NLQ92738 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6NLQ92738 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6NLQ92738 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP6NLQ92738 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
USP6NLQ92738 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6NLQ92738 KRT8P49-201ENST00000604166 1432 ntBASIC18.97■□□□□ 0.63
USP6NLQ92738 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6NLQ92738 AC008764.6-201ENST00000595909 2069 ntBASIC18.97■□□□□ 0.63
USP6NLQ92738 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USP6NLQ92738 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP6NLQ92738 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6NLQ92738 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6NLQ92738 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6NLQ92738 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP6NLQ92738 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6NLQ92738 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 AL035456.1-201ENST00000456064 1369 ntBASIC18.96■□□□□ 0.63
USP6NLQ92738 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USP6NLQ92738 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USP6NLQ92738 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
USP6NLQ92738 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USP6NLQ92738 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.96■□□□□ 0.63
USP6NLQ92738 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.96■□□□□ 0.63
USP6NLQ92738 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6NLQ92738 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 KRT18P34-201ENST00000488218 1270 ntBASIC18.96■□□□□ 0.63
USP6NLQ92738 API5-211ENST00000534695 560 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6NLQ92738 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.96■□□□□ 0.63
USP6NLQ92738 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP6NLQ92738 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 LTB4R2-202ENST00000528054 3092 ntBASIC18.96■□□□□ 0.63
USP6NLQ92738 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
USP6NLQ92738 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6NLQ92738 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USP6NLQ92738 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
USP6NLQ92738 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.95■□□□□ 0.62
USP6NLQ92738 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USP6NLQ92738 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.95■□□□□ 0.62
USP6NLQ92738 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.95■□□□□ 0.62
USP6NLQ92738 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
USP6NLQ92738 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.95■□□□□ 0.62
USP6NLQ92738 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP6NLQ92738 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.95■□□□□ 0.62
USP6NLQ92738 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6NLQ92738 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6NLQ92738 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.94■□□□□ 0.62
USP6NLQ92738 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.94■□□□□ 0.62
USP6NLQ92738 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
USP6NLQ92738 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms