Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
SVIPQ8NHG7 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SVIPQ8NHG7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SVIPQ8NHG7 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SVIPQ8NHG7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SVIPQ8NHG7 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SVIPQ8NHG7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.42□□□□□ -0.74
SVIPQ8NHG7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 PCDHA5-203ENST00000614258 4248 ntBASIC10.41□□□□□ -0.74
SVIPQ8NHG7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 KLKB1-207ENST00000513864 2175 ntTSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 ZNF200-204ENST00000414144 3306 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 PCDHA6-201ENST00000378126 3267 ntBASIC10.41□□□□□ -0.74
SVIPQ8NHG7 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 ZNF559-206ENST00000587557 2991 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 TMEM107-208ENST00000532998 2358 ntTSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 EXD2-205ENST00000409675 2828 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 CSF2RA-205ENST00000381524 2291 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 KIRREL3-201ENST00000525144 3808 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 AC048338.1-201ENST00000535844 2748 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 ZNF682-203ENST00000397165 3245 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 HIST1H3G-201ENST00000614378 2411 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SVIPQ8NHG7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 PAM-203ENST00000346918 3302 ntTSL 5 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 ZBED1P1-201ENST00000502364 1930 ntBASIC10.4□□□□□ -0.74
SVIPQ8NHG7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms