Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.02■□□□□ 0.15
PSD4Q8NDX1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PSD4Q8NDX1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 PMS2P1-201ENST00000431037 1228 ntBASIC16.01■□□□□ 0.15
PSD4Q8NDX1 AC098831.1-202ENST00000438821 336 ntBASIC16.01■□□□□ 0.15
PSD4Q8NDX1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 RPL13AP23-201ENST00000480739 586 ntBASIC16.01■□□□□ 0.15
PSD4Q8NDX1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 AL589182.2-201ENST00000619332 1049 ntBASIC16.01■□□□□ 0.15
PSD4Q8NDX1 LINC01451-201ENST00000623792 534 ntBASIC16.01■□□□□ 0.15
PSD4Q8NDX1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PSD4Q8NDX1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16■□□□□ 0.15
PSD4Q8NDX1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 DOC2GP-204ENST00000639052 2548 ntBASIC16■□□□□ 0.15
PSD4Q8NDX1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 AC005104.2-201ENST00000427818 678 ntBASIC16■□□□□ 0.15
PSD4Q8NDX1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16■□□□□ 0.15
PSD4Q8NDX1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16■□□□□ 0.15
PSD4Q8NDX1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16■□□□□ 0.15
PSD4Q8NDX1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 IGHV3-22-201ENST00000520721 359 ntBASIC16■□□□□ 0.15
PSD4Q8NDX1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16■□□□□ 0.15
PSD4Q8NDX1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16■□□□□ 0.15
PSD4Q8NDX1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 AC106730.1-201ENST00000566722 1090 ntBASIC16■□□□□ 0.15
PSD4Q8NDX1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16■□□□□ 0.15
PSD4Q8NDX1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16■□□□□ 0.15
PSD4Q8NDX1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16■□□□□ 0.15
PSD4Q8NDX1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16■□□□□ 0.15
PSD4Q8NDX1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
PSD4Q8NDX1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16■□□□□ 0.15
PSD4Q8NDX1 AC009336.1-201ENST00000608941 1553 ntBASIC16■□□□□ 0.15
PSD4Q8NDX1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16■□□□□ 0.15
PSD4Q8NDX1 ZNF259P1-201ENST00000407656 1365 ntBASIC16■□□□□ 0.15
PSD4Q8NDX1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 TSPY26P-202ENST00000565928 3884 ntBASIC15.99■□□□□ 0.15
PSD4Q8NDX1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms