Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRTM2Q8N967 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.81□□□□□ -0.2
LRTM2Q8N967 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
LRTM2Q8N967 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.81□□□□□ -0.2
LRTM2Q8N967 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LRTM2Q8N967 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRTM2Q8N967 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
LRTM2Q8N967 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRTM2Q8N967 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.79□□□□□ -0.2
LRTM2Q8N967 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 TSPY15P-201ENST00000457163 923 ntBASIC13.79□□□□□ -0.2
LRTM2Q8N967 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.79□□□□□ -0.2
LRTM2Q8N967 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms