Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 AC004967.1-201ENST00000453589 447 ntBASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 AC012313.1-201ENST00000593393 3059 ntBASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 RNF216P1-203ENST00000404404 2427 ntBASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 AL512652.2-201ENST00000625156 1716 ntBASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 AL603756.1-201ENST00000606511 2163 ntBASIC15.85■□□□□ 0.13
ARHGEF39Q8N4T4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 CEND1P1-201ENST00000451006 455 ntBASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 AL513210.1-201ENST00000629608 234 ntBASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms