Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 LINC00265-3P-201ENST00000447588 903 ntBASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.78■□□□□ 0.12
DEPDC4Q8N2C3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 AL353692.3-201ENST00000407031 1396 ntBASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 AC096633.1-201ENST00000422446 749 ntBASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 DRAXINP1-201ENST00000437611 948 ntBASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 AP000867.3-201ENST00000524675 377 ntBASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 Z69720.1-201ENST00000601483 472 ntBASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.77■□□□□ 0.12
DEPDC4Q8N2C3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DEPDC4Q8N2C3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AC079328.2-201ENST00000561241 3354 ntBASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AC007950.2-201ENST00000615045 2347 ntBASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AC104819.1-201ENST00000504587 486 ntBASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 IGHV3-52-201ENST00000519770 353 ntBASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AP002490.2-201ENST00000524791 560 ntBASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AL121894.2-201ENST00000602977 491 ntBASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AC124864.1-201ENST00000623408 392 ntBASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms