Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.21■□□□□ 0.83
SLX4Q8IY92 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.21■□□□□ 0.83
SLX4Q8IY92 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.21■□□□□ 0.83
SLX4Q8IY92 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.21■□□□□ 0.83
SLX4Q8IY92 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLX4Q8IY92 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
SLX4Q8IY92 BNIP3P42-201ENST00000454982 569 ntBASIC20.2■□□□□ 0.82
SLX4Q8IY92 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 BNIP3P29-201ENST00000598302 571 ntBASIC20.2■□□□□ 0.82
SLX4Q8IY92 AC011447.5-201ENST00000616168 564 ntBASIC20.2■□□□□ 0.82
SLX4Q8IY92 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 AC124947.2-201ENST00000547118 1133 ntBASIC20.2■□□□□ 0.82
SLX4Q8IY92 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLX4Q8IY92 AC092337.1-201ENST00000568699 1129 ntBASIC20.2■□□□□ 0.82
SLX4Q8IY92 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SLX4Q8IY92 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLX4Q8IY92 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLX4Q8IY92 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 AC013467.2-201ENST00000605472 835 ntBASIC20.19■□□□□ 0.82
SLX4Q8IY92 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLX4Q8IY92 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLX4Q8IY92 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLX4Q8IY92 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLX4Q8IY92 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.19■□□□□ 0.82
SLX4Q8IY92 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 SERBP1P3-201ENST00000459980 809 ntBASIC20.18■□□□□ 0.82
SLX4Q8IY92 MIR4538-201ENST00000581377 78 ntBASIC20.18■□□□□ 0.82
SLX4Q8IY92 AC024267.1-201ENST00000582320 895 ntBASIC20.18■□□□□ 0.82
SLX4Q8IY92 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.18■□□□□ 0.82
SLX4Q8IY92 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms