Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 PCDHA14-201ENST00000506751 2298 ntBASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 PMS2P4-201ENST00000412466 1052 ntBASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 KRT18P3-201ENST00000451602 1288 ntBASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 RNA5SP416-201ENST00000516838 111 ntBASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 AC109635.5-201ENST00000533593 962 ntBASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 AL031055.1-201ENST00000606362 631 ntBASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 AC025580.3-201ENST00000617932 1424 ntBASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.23■□□□□ 0.51
C12orf56Q8IXR9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 UBALD1-205ENST00000590891 2641 ntBASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 MED15P5-201ENST00000423150 992 ntBASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 AC021097.1-201ENST00000607902 574 ntBASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 AC084018.2-201ENST00000613093 2607 ntBASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 BCAR1-209ENST00000546196 1340 ntBASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C12orf56Q8IXR9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 AL118508.1-201ENST00000613502 2345 ntBASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 AL022342.1-201ENST00000400363 863 ntBASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 AC140658.5-201ENST00000438532 169 ntBASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 PDPK2P-202ENST00000562415 1191 ntBASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 GPAA1P2-202ENST00000606848 1787 ntBASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.21■□□□□ 0.51
C12orf56Q8IXR9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms