Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 FRMD8P1-201ENST00000440433 1524 ntBASIC20.88■□□□□ 0.93
COL23A1Q86Y22 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL23A1Q86Y22 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.88■□□□□ 0.93
COL23A1Q86Y22 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COL23A1Q86Y22 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.88■□□□□ 0.93
COL23A1Q86Y22 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 AL021920.2-201ENST00000624828 1351 ntBASIC20.87■□□□□ 0.93
COL23A1Q86Y22 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 RPSAP52-203ENST00000622976 1023 ntBASIC20.87■□□□□ 0.93
COL23A1Q86Y22 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.87■□□□□ 0.93
COL23A1Q86Y22 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 AL355312.1-201ENST00000407115 2176 ntBASIC20.86■□□□□ 0.93
COL23A1Q86Y22 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 AC093525.8-201ENST00000624099 1342 ntBASIC20.86■□□□□ 0.93
COL23A1Q86Y22 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 BTNL10-201ENST00000595971 695 ntBASIC20.86■□□□□ 0.93
COL23A1Q86Y22 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 MIR8072-201ENST00000614241 80 ntBASIC20.86■□□□□ 0.93
COL23A1Q86Y22 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.86■□□□□ 0.93
COL23A1Q86Y22 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL23A1Q86Y22 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 CDC14C-201ENST00000428251 1719 ntBASIC20.85■□□□□ 0.93
COL23A1Q86Y22 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 AC015936.2-201ENST00000593177 259 ntBASIC20.85■□□□□ 0.93
COL23A1Q86Y22 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COL23A1Q86Y22 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 AC012317.2-201ENST00000623305 2251 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms