Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 SAPCD2P3-201ENST00000455031 850 ntBASIC15.61■□□□□ 0.09
VRK2Q86Y07 SCARNA2-201ENST00000458748 420 ntBASIC15.61■□□□□ 0.09
VRK2Q86Y07 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 AC021087.4-201ENST00000563761 564 ntBASIC15.61■□□□□ 0.09
VRK2Q86Y07 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 AC025062.2-201ENST00000605477 670 ntBASIC15.61■□□□□ 0.09
VRK2Q86Y07 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.61■□□□□ 0.09
VRK2Q86Y07 AC006277.1-201ENST00000624348 1610 ntBASIC15.61■□□□□ 0.09
VRK2Q86Y07 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
VRK2Q86Y07 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VRK2Q86Y07 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 PTCHD3P3-201ENST00000403073 906 ntBASIC15.6■□□□□ 0.09
VRK2Q86Y07 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 PAWRP1-201ENST00000451083 565 ntBASIC15.6■□□□□ 0.09
VRK2Q86Y07 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 CLEC4GP1-201ENST00000596555 870 ntBASIC15.6■□□□□ 0.09
VRK2Q86Y07 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VRK2Q86Y07 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.6■□□□□ 0.09
VRK2Q86Y07 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VRK2Q86Y07 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VRK2Q86Y07 AC006538.1-201ENST00000567905 1585 ntBASIC15.59■□□□□ 0.09
VRK2Q86Y07 AC006504.4-201ENST00000592118 1568 ntBASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms