Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.08□□□□□ -0.15
ZNF546Q86UE3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 CRYGFP-201ENST00000418459 633 ntBASIC14.08□□□□□ -0.16
ZNF546Q86UE3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 OR2I1P-210ENST00000642037 4691 ntBASIC14.08□□□□□ -0.16
ZNF546Q86UE3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 AL645728.1-201ENST00000366221 2101 ntBASIC14.08□□□□□ -0.16
ZNF546Q86UE3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ZNF546Q86UE3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF546Q86UE3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF546Q86UE3 KRT18P65-201ENST00000439811 1286 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms