Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 HYMAI-201ENST00000635591 3347 ntBASIC17.02■□□□□ 0.32
RAPH1Q70E73 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 RCN1P2-201ENST00000398357 915 ntBASIC17.02■□□□□ 0.32
RAPH1Q70E73 PCED1CP-201ENST00000419887 785 ntBASIC17.02■□□□□ 0.32
RAPH1Q70E73 DRAXINP1-201ENST00000437611 948 ntBASIC17.02■□□□□ 0.32
RAPH1Q70E73 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 SIGLEC30P-201ENST00000455569 941 ntBASIC17.02■□□□□ 0.32
RAPH1Q70E73 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 TPSP2-201ENST00000561760 610 ntBASIC17.02■□□□□ 0.32
RAPH1Q70E73 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 AC116407.4-201ENST00000623319 1061 ntBASIC17.02■□□□□ 0.32
RAPH1Q70E73 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RAPH1Q70E73 AC132872.4-202ENST00000622924 2756 ntBASIC17.02■□□□□ 0.31
RAPH1Q70E73 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAPH1Q70E73 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAPH1Q70E73 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAPH1Q70E73 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAPH1Q70E73 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAPH1Q70E73 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.02■□□□□ 0.31
RAPH1Q70E73 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RAPH1Q70E73 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.02■□□□□ 0.31
RAPH1Q70E73 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RAPH1Q70E73 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.02■□□□□ 0.31
RAPH1Q70E73 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAPH1Q70E73 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAPH1Q70E73 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAPH1Q70E73 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
RAPH1Q70E73 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 AL020989.1-201ENST00000422979 469 ntBASIC17.01■□□□□ 0.31
RAPH1Q70E73 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 BNIP3P18-201ENST00000593976 575 ntBASIC17.01■□□□□ 0.31
RAPH1Q70E73 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 PMPCAP1-201ENST00000508114 1576 ntBASIC17.01■□□□□ 0.31
RAPH1Q70E73 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.01■□□□□ 0.31
RAPH1Q70E73 IER3-202ENST00000376377 1350 ntBASIC17.01■□□□□ 0.31
RAPH1Q70E73 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAPH1Q70E73 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17■□□□□ 0.31
RAPH1Q70E73 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17■□□□□ 0.31
RAPH1Q70E73 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17■□□□□ 0.31
RAPH1Q70E73 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAPH1Q70E73 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAPH1Q70E73 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17■□□□□ 0.31
RAPH1Q70E73 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RAPH1Q70E73 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAPH1Q70E73 AP002383.4-201ENST00000442518 975 ntBASIC17■□□□□ 0.31
RAPH1Q70E73 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17■□□□□ 0.31
RAPH1Q70E73 AP002490.2-201ENST00000524791 560 ntBASIC17■□□□□ 0.31
RAPH1Q70E73 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17■□□□□ 0.31
RAPH1Q70E73 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17■□□□□ 0.31
RAPH1Q70E73 AC074051.2-201ENST00000565115 352 ntBASIC17■□□□□ 0.31
RAPH1Q70E73 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17■□□□□ 0.31
RAPH1Q70E73 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms