Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.48■□□□□ 0.71
PDZRN4Q6ZMN7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 AC092171.3-201ENST00000610122 2651 ntBASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 AC011840.4-201ENST00000578471 627 ntBASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 AC063926.3-201ENST00000624734 5658 ntBASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDZRN4Q6ZMN7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 NSUN5P1-202ENST00000421140 1535 ntBASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 NSUN5P2-203ENST00000457352 1529 ntBASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 SDHAP2-201ENST00000455183 2001 ntBASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 EMBP1-201ENST00000458200 901 ntBASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 AP005901.3-202ENST00000581653 237 ntBASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 AL353801.3-201ENST00000609898 542 ntBASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 AC116353.5-201ENST00000638148 1699 ntBASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDZRN4Q6ZMN7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms