Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 MIR564-202ENST00000385049 94 ntBASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 KRT16P4-201ENST00000453883 522 ntBASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 GUSBP12-201ENST00000513727 720 ntBASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 AL121912.1-201ENST00000603683 238 ntBASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 AL353801.3-201ENST00000609898 542 ntBASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 AC120114.3-201ENST00000611923 658 ntBASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 AC023511.2-201ENST00000618803 211 ntBASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 SNX18-202ENST00000343017 3140 ntBASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 HOXB1-202ENST00000577092 1414 ntBASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 MRPL3P1-201ENST00000400109 1033 ntBASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 AL662844.1-201ENST00000546340 181 ntBASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXR1Q6PIV2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
FOXR1Q6PIV2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
FOXR1Q6PIV2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
FOXR1Q6PIV2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.64■□□□□ 0.42
FOXR1Q6PIV2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 AP000593.1-201ENST00000393668 712 ntBASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 MINOS1P3-201ENST00000457048 203 ntBASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 VENTXP7-201ENST00000475503 772 ntBASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 SLC25A6P4-201ENST00000586535 553 ntBASIC17.64■□□□□ 0.41
FOXR1Q6PIV2 AL592071.1-201ENST00000611956 408 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms