Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.71□□□□□ -0.06
ATPAF1Q5TC12 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATPAF1Q5TC12 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATPAF1Q5TC12 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
ATPAF1Q5TC12 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.71□□□□□ -0.06
ATPAF1Q5TC12 HYMAI-201ENST00000635591 3347 ntBASIC14.71□□□□□ -0.06
ATPAF1Q5TC12 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 AL353593.2-201ENST00000602529 1483 ntBASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 KRT18P31-201ENST00000506277 1292 ntBASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 AC091304.2-201ENST00000564639 760 ntBASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 AC111152.3-201ENST00000569699 673 ntBASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 AC019129.2-201ENST00000609837 1235 ntBASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.7□□□□□ -0.06
ATPAF1Q5TC12 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms