Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SOX4Q06945 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SOX4Q06945 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.92■□□□□ 0.46
SOX4Q06945 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX4Q06945 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.92■□□□□ 0.46
SOX4Q06945 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.92■□□□□ 0.46
SOX4Q06945 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX4Q06945 IGHV3-62-201ENST00000520057 340 ntBASIC17.92■□□□□ 0.46
SOX4Q06945 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
SOX4Q06945 SLC25A39P2-201ENST00000537614 270 ntBASIC17.92■□□□□ 0.46
SOX4Q06945 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
SOX4Q06945 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SOX4Q06945 KRT8P23-201ENST00000560090 1207 ntBASIC17.92■□□□□ 0.46
SOX4Q06945 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.92■□□□□ 0.46
SOX4Q06945 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 AC008267.7-201ENST00000624570 1194 ntBASIC17.92■□□□□ 0.46
SOX4Q06945 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX4Q06945 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.92■□□□□ 0.46
SOX4Q06945 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.92■□□□□ 0.46
SOX4Q06945 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.92■□□□□ 0.46
SOX4Q06945 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SOX4Q06945 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX4Q06945 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 AC005915.1-201ENST00000624912 2018 ntBASIC17.91■□□□□ 0.46
SOX4Q06945 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 KRT8P39-201ENST00000396270 1433 ntBASIC17.91■□□□□ 0.46
SOX4Q06945 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX4Q06945 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX4Q06945 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.91■□□□□ 0.46
SOX4Q06945 RBPMS2P1-201ENST00000437762 623 ntBASIC17.91■□□□□ 0.46
SOX4Q06945 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.91■□□□□ 0.46
SOX4Q06945 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.91■□□□□ 0.46
SOX4Q06945 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.91■□□□□ 0.46
SOX4Q06945 AP000842.3-202ENST00000569238 1080 ntBASIC17.91■□□□□ 0.46
SOX4Q06945 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SOX4Q06945 Z92544.3-201ENST00000624747 417 ntBASIC17.91■□□□□ 0.46
SOX4Q06945 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX4Q06945 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SOX4Q06945 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX4Q06945 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SOX4Q06945 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SOX4Q06945 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX4Q06945 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SOX4Q06945 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX4Q06945 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.9■□□□□ 0.46
SOX4Q06945 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX4Q06945 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.9■□□□□ 0.46
SOX4Q06945 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SOX4Q06945 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.9■□□□□ 0.46
SOX4Q06945 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX4Q06945 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX4Q06945 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SOX4Q06945 MIR346-201ENST00000362234 95 ntBASIC17.9■□□□□ 0.46
SOX4Q06945 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX4Q06945 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX4Q06945 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SOX4Q06945 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX4Q06945 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX4Q06945 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX4Q06945 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX4Q06945 AC093512.1-201ENST00000617969 520 ntBASIC17.9■□□□□ 0.46
SOX4Q06945 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX4Q06945 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.9■□□□□ 0.46
SOX4Q06945 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SOX4Q06945 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.9■□□□□ 0.46
SOX4Q06945 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms