Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 AL139424.1-201ENST00000607572 797 ntBASIC16.28■□□□□ 0.2
HMGCS1Q01581 AL121772.3-201ENST00000610840 674 ntBASIC16.28■□□□□ 0.2
HMGCS1Q01581 AL355877.3-201ENST00000622820 899 ntBASIC16.28■□□□□ 0.2
HMGCS1Q01581 AC012313.10-201ENST00000623509 926 ntBASIC16.28■□□□□ 0.2
HMGCS1Q01581 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCS1Q01581 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCS1Q01581 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 LINC00895-201ENST00000629028 1637 ntBASIC16.27■□□□□ 0.2
HMGCS1Q01581 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 FGFR3P6-201ENST00000457012 610 ntBASIC16.27■□□□□ 0.2
HMGCS1Q01581 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 AC008608.2-201ENST00000606089 416 ntBASIC16.27■□□□□ 0.2
HMGCS1Q01581 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGCS1Q01581 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCS1Q01581 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCS1Q01581 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCS1Q01581 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCS1Q01581 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCS1Q01581 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCS1Q01581 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCS1Q01581 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCS1Q01581 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.26■□□□□ 0.19
HMGCS1Q01581 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 AC008894.3-201ENST00000624324 3103 ntBASIC16.26■□□□□ 0.19
HMGCS1Q01581 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 TSPY19P-201ENST00000418461 509 ntBASIC16.26■□□□□ 0.19
HMGCS1Q01581 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 TSPY18P-201ENST00000441642 509 ntBASIC16.26■□□□□ 0.19
HMGCS1Q01581 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 AC091304.2-201ENST00000564639 760 ntBASIC16.26■□□□□ 0.19
HMGCS1Q01581 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 AL589182.2-201ENST00000619332 1049 ntBASIC16.26■□□□□ 0.19
HMGCS1Q01581 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 AC005052.1-201ENST00000625181 2492 ntBASIC16.26■□□□□ 0.19
HMGCS1Q01581 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms