Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN2P57739 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 GPS2P2-201ENST00000430745 888 ntBASIC16.6■□□□□ 0.25
CLDN2P57739 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN2P57739 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLDN2P57739 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN2P57739 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN2P57739 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 AC141586.5-201ENST00000624546 2050 ntBASIC16.6■□□□□ 0.25
CLDN2P57739 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN2P57739 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN2P57739 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN2P57739 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN2P57739 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN2P57739 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN2P57739 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN2P57739 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CLDN2P57739 PMS2P4-201ENST00000412466 1052 ntBASIC16.59■□□□□ 0.25
CLDN2P57739 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN2P57739 DUX4L27-201ENST00000554796 1261 ntBASIC16.59■□□□□ 0.25
CLDN2P57739 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN2P57739 MIR4492-201ENST00000581627 80 ntBASIC16.59■□□□□ 0.25
CLDN2P57739 AC005498.2-205ENST00000593218 784 ntBASIC16.59■□□□□ 0.25
CLDN2P57739 AC011467.4-201ENST00000594891 528 ntBASIC16.59■□□□□ 0.25
CLDN2P57739 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN2P57739 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN2P57739 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN2P57739 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN2P57739 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN2P57739 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN2P57739 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CLDN2P57739 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 AC092068.3-201ENST00000587894 2016 ntBASIC16.58■□□□□ 0.25
CLDN2P57739 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CLDN2P57739 AC108860.2-201ENST00000562760 2183 ntBASIC16.58■□□□□ 0.25
CLDN2P57739 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.58■□□□□ 0.25
CLDN2P57739 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN2P57739 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN2P57739 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN2P57739 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN2P57739 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN2P57739 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.58■□□□□ 0.24
CLDN2P57739 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN2P57739 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN2P57739 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN2P57739 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN2P57739 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN2P57739 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN2P57739 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms