Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2DP55273 AL671710.1-201ENST00000610245 2349 ntBASIC16.66■□□□□ 0.26
CDKN2DP55273 AL139011.1-202ENST00000642063 584 ntBASIC16.66■□□□□ 0.26
CDKN2DP55273 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2DP55273 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKN2DP55273 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.66■□□□□ 0.26
CDKN2DP55273 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2DP55273 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2DP55273 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2DP55273 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2DP55273 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2DP55273 SLC22A20-204ENST00000530038 1673 ntBASIC16.65■□□□□ 0.26
CDKN2DP55273 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKN2DP55273 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKN2DP55273 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 FAM197Y8-203ENST00000450145 560 ntBASIC16.65■□□□□ 0.26
CDKN2DP55273 AC018712.1-201ENST00000455767 687 ntBASIC16.65■□□□□ 0.26
CDKN2DP55273 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.65■□□□□ 0.26
CDKN2DP55273 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 AC012640.2-201ENST00000561606 901 ntBASIC16.65■□□□□ 0.26
CDKN2DP55273 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 AL121912.1-201ENST00000603683 238 ntBASIC16.65■□□□□ 0.26
CDKN2DP55273 AL691432.3-201ENST00000621860 400 ntBASIC16.65■□□□□ 0.26
CDKN2DP55273 AC148477.8-201ENST00000624298 468 ntBASIC16.65■□□□□ 0.26
CDKN2DP55273 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDKN2DP55273 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKN2DP55273 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
CDKN2DP55273 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDKN2DP55273 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDKN2DP55273 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2DP55273 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CDKN2DP55273 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2DP55273 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDKN2DP55273 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDKN2DP55273 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2DP55273 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 PMS2P1-201ENST00000431037 1228 ntBASIC16.64■□□□□ 0.25
CDKN2DP55273 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2DP55273 AC136632.2-201ENST00000512891 861 ntBASIC16.64■□□□□ 0.25
CDKN2DP55273 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.64■□□□□ 0.25
CDKN2DP55273 AC008735.5-201ENST00000623544 497 ntBASIC16.64■□□□□ 0.25
CDKN2DP55273 AP002414.3-201ENST00000589352 1468 ntBASIC16.64■□□□□ 0.25
CDKN2DP55273 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2DP55273 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2DP55273 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.64■□□□□ 0.25
CDKN2DP55273 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDKN2DP55273 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2DP55273 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CDKN2DP55273 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDKN2DP55273 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDKN2DP55273 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2DP55273 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms