Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.55■□□□□ 0.56
PMS1P54277 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PMS1P54277 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.55■□□□□ 0.56
PMS1P54277 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PMS1P54277 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.55■□□□□ 0.56
PMS1P54277 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PMS1P54277 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.55■□□□□ 0.56
PMS1P54277 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.55■□□□□ 0.56
PMS1P54277 DUSP5P1-201ENST00000441325 1139 ntBASIC18.55■□□□□ 0.56
PMS1P54277 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.55■□□□□ 0.56
PMS1P54277 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.55■□□□□ 0.56
PMS1P54277 AC107918.2-201ENST00000530817 355 ntBASIC18.55■□□□□ 0.56
PMS1P54277 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.55■□□□□ 0.56
PMS1P54277 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.55■□□□□ 0.56
PMS1P54277 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.55■□□□□ 0.56
PMS1P54277 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
PMS1P54277 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PMS1P54277 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PMS1P54277 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.55■□□□□ 0.56
PMS1P54277 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PMS1P54277 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PMS1P54277 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 PMS2P1-201ENST00000431037 1228 ntBASIC18.54■□□□□ 0.56
PMS1P54277 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 RPS15P9-201ENST00000494093 319 ntBASIC18.54■□□□□ 0.56
PMS1P54277 RNPS1P1-201ENST00000507437 918 ntBASIC18.54■□□□□ 0.56
PMS1P54277 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.54■□□□□ 0.56
PMS1P54277 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.54■□□□□ 0.56
PMS1P54277 AC012640.2-201ENST00000561606 901 ntBASIC18.54■□□□□ 0.56
PMS1P54277 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.54■□□□□ 0.56
PMS1P54277 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.54■□□□□ 0.56
PMS1P54277 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.54■□□□□ 0.56
PMS1P54277 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PMS1P54277 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.54■□□□□ 0.56
PMS1P54277 AF228730.7-201ENST00000641842 219 ntBASIC18.54■□□□□ 0.56
PMS1P54277 AL139011.1-202ENST00000642063 584 ntBASIC18.54■□□□□ 0.56
PMS1P54277 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.54■□□□□ 0.56
PMS1P54277 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.54■□□□□ 0.56
PMS1P54277 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PMS1P54277 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.53■□□□□ 0.56
PMS1P54277 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PMS1P54277 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PMS1P54277 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.53■□□□□ 0.56
PMS1P54277 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.53■□□□□ 0.56
PMS1P54277 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
PMS1P54277 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.53■□□□□ 0.56
PMS1P54277 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.53■□□□□ 0.56
PMS1P54277 LINC01711-201ENST00000598340 967 ntBASIC18.53■□□□□ 0.56
PMS1P54277 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 AC148477.8-201ENST00000624298 468 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms