Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 KRT18P1-202ENST00000452408 1331 ntBASIC17.35■□□□□ 0.37
ITGA8P53708 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.35■□□□□ 0.37
ITGA8P53708 AC005332.1-201ENST00000577698 1310 ntBASIC17.35■□□□□ 0.37
ITGA8P53708 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.35■□□□□ 0.37
ITGA8P53708 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
ITGA8P53708 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
ITGA8P53708 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITGA8P53708 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.34■□□□□ 0.37
ITGA8P53708 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.34■□□□□ 0.37
ITGA8P53708 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ITGA8P53708 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
ITGA8P53708 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ITGA8P53708 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.34■□□□□ 0.37
ITGA8P53708 AL031133.1-201ENST00000406807 723 ntBASIC17.34■□□□□ 0.37
ITGA8P53708 LINC00982-205ENST00000420957 435 ntBASIC17.34■□□□□ 0.37
ITGA8P53708 NSUN5P1-202ENST00000421140 1535 ntBASIC17.34■□□□□ 0.37
ITGA8P53708 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
ITGA8P53708 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 NSUN5P2-203ENST00000457352 1529 ntBASIC17.34■□□□□ 0.37
ITGA8P53708 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.34■□□□□ 0.37
ITGA8P53708 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
ITGA8P53708 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.34■□□□□ 0.37
ITGA8P53708 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
ITGA8P53708 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.34■□□□□ 0.37
ITGA8P53708 KRT8P49-201ENST00000604166 1432 ntBASIC17.34■□□□□ 0.37
ITGA8P53708 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.34■□□□□ 0.37
ITGA8P53708 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.34■□□□□ 0.37
ITGA8P53708 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ITGA8P53708 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ITGA8P53708 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.34■□□□□ 0.37
ITGA8P53708 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITGA8P53708 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.33■□□□□ 0.37
ITGA8P53708 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.33■□□□□ 0.37
ITGA8P53708 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.33■□□□□ 0.37
ITGA8P53708 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.33■□□□□ 0.37
ITGA8P53708 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ITGA8P53708 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ITGA8P53708 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.33■□□□□ 0.36
ITGA8P53708 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.33■□□□□ 0.36
ITGA8P53708 KRT17P6-201ENST00000453795 1220 ntBASIC17.33■□□□□ 0.36
ITGA8P53708 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ITGA8P53708 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.33■□□□□ 0.36
ITGA8P53708 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.33■□□□□ 0.36
ITGA8P53708 TPSP2-201ENST00000561760 610 ntBASIC17.33■□□□□ 0.36
ITGA8P53708 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.33■□□□□ 0.36
ITGA8P53708 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
ITGA8P53708 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
ITGA8P53708 AL121956.5-201ENST00000625261 221 ntBASIC17.33■□□□□ 0.36
ITGA8P53708 AC105917.1-201ENST00000506637 2539 ntBASIC17.33■□□□□ 0.36
ITGA8P53708 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ITGA8P53708 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ITGA8P53708 AC024909.3-201ENST00000611513 2257 ntBASIC17.33■□□□□ 0.36
ITGA8P53708 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ITGA8P53708 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms