Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ACLYP53396 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 BTBD7P1-201ENST00000447253 1453 ntBASIC18.41■□□□□ 0.54
ACLYP53396 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.41■□□□□ 0.54
ACLYP53396 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.41■□□□□ 0.54
ACLYP53396 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.41■□□□□ 0.54
ACLYP53396 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.41■□□□□ 0.54
ACLYP53396 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.41■□□□□ 0.54
ACLYP53396 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.41■□□□□ 0.54
ACLYP53396 RNA5SP410-201ENST00000516285 106 ntBASIC18.41■□□□□ 0.54
ACLYP53396 ZNF890P-202ENST00000530367 1156 ntBASIC18.41■□□□□ 0.54
ACLYP53396 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.41■□□□□ 0.54
ACLYP53396 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.41■□□□□ 0.54
ACLYP53396 AC104794.3-201ENST00000566840 1248 ntBASIC18.41■□□□□ 0.54
ACLYP53396 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.41■□□□□ 0.54
ACLYP53396 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.41■□□□□ 0.54
ACLYP53396 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
ACLYP53396 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
ACLYP53396 AL391825.1-201ENST00000457671 1364 ntBASIC18.41■□□□□ 0.54
ACLYP53396 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.41■□□□□ 0.54
ACLYP53396 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ACLYP53396 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.41■□□□□ 0.54
ACLYP53396 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ACLYP53396 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACLYP53396 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ACLYP53396 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 AC087499.6-201ENST00000411576 835 ntBASIC18.4■□□□□ 0.54
ACLYP53396 AP006294.1-201ENST00000415407 339 ntBASIC18.4■□□□□ 0.54
ACLYP53396 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.4■□□□□ 0.54
ACLYP53396 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.4■□□□□ 0.54
ACLYP53396 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.4■□□□□ 0.54
ACLYP53396 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.4■□□□□ 0.54
ACLYP53396 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.4■□□□□ 0.54
ACLYP53396 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.4■□□□□ 0.54
ACLYP53396 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
ACLYP53396 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACLYP53396 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
ACLYP53396 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ACLYP53396 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ACLYP53396 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.39■□□□□ 0.53
ACLYP53396 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.39■□□□□ 0.53
ACLYP53396 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.39■□□□□ 0.53
ACLYP53396 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ACLYP53396 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.39■□□□□ 0.53
ACLYP53396 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ACLYP53396 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ACLYP53396 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 AL512384.1-201ENST00000406683 331 ntBASIC18.39■□□□□ 0.53
ACLYP53396 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.39■□□□□ 0.53
ACLYP53396 RN7SL752P-201ENST00000463779 287 ntBASIC18.39■□□□□ 0.53
ACLYP53396 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.39■□□□□ 0.53
ACLYP53396 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ACLYP53396 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.39■□□□□ 0.53
ACLYP53396 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ACLYP53396 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.39■□□□□ 0.53
ACLYP53396 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACLYP53396 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms