Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PDX1P52945 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.37■□□□□ 0.21
PDX1P52945 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PDX1P52945 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.37■□□□□ 0.21
PDX1P52945 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PDX1P52945 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.37■□□□□ 0.21
PDX1P52945 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.37■□□□□ 0.21
PDX1P52945 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PDX1P52945 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.37■□□□□ 0.21
PDX1P52945 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 AC080080.1-201ENST00000625121 2420 ntBASIC16.36■□□□□ 0.21
PDX1P52945 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PDX1P52945 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 FAM86GP-201ENST00000448322 971 ntBASIC16.36■□□□□ 0.21
PDX1P52945 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.36■□□□□ 0.21
PDX1P52945 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.36■□□□□ 0.21
PDX1P52945 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PDX1P52945 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDX1P52945 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.36■□□□□ 0.21
PDX1P52945 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PDX1P52945 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDX1P52945 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 LYSMD4-203ENST00000378904 2122 ntBASIC16.35■□□□□ 0.21
PDX1P52945 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 AL671277.1-201ENST00000429656 993 ntBASIC16.35■□□□□ 0.21
PDX1P52945 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.35■□□□□ 0.21
PDX1P52945 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.35■□□□□ 0.21
PDX1P52945 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms