Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.59■□□□□ 0.25
GTF2A1P52655 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.59■□□□□ 0.25
GTF2A1P52655 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.59■□□□□ 0.25
GTF2A1P52655 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 HLA-A-209ENST00000638375 975 ntBASIC16.59■□□□□ 0.25
GTF2A1P52655 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.59■□□□□ 0.25
GTF2A1P52655 LINC02012-201ENST00000608206 1725 ntBASIC16.59■□□□□ 0.25
GTF2A1P52655 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.58■□□□□ 0.25
GTF2A1P52655 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GTF2A1P52655 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GTF2A1P52655 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.58■□□□□ 0.24
GTF2A1P52655 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 AC060766.5-201ENST00000590539 871 ntBASIC16.58■□□□□ 0.24
GTF2A1P52655 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.58■□□□□ 0.24
GTF2A1P52655 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GTF2A1P52655 AL121832.2-201ENST00000610979 668 ntBASIC16.58■□□□□ 0.24
GTF2A1P52655 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.58■□□□□ 0.24
GTF2A1P52655 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
GTF2A1P52655 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.58■□□□□ 0.24
GTF2A1P52655 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.58■□□□□ 0.24
GTF2A1P52655 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
GTF2A1P52655 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
GTF2A1P52655 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A1P52655 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
GTF2A1P52655 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 CICP17-201ENST00000418553 2377 ntBASIC16.57■□□□□ 0.24
GTF2A1P52655 AL671710.1-201ENST00000610245 2349 ntBASIC16.57■□□□□ 0.24
GTF2A1P52655 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.57■□□□□ 0.24
GTF2A1P52655 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.57■□□□□ 0.24
GTF2A1P52655 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
GTF2A1P52655 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.57■□□□□ 0.24
GTF2A1P52655 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.57■□□□□ 0.24
GTF2A1P52655 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
GTF2A1P52655 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
GTF2A1P52655 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 SOX15-203ENST00000570788 1093 ntBASIC16.57■□□□□ 0.24
GTF2A1P52655 MIR5787-201ENST00000611784 55 ntBASIC16.57■□□□□ 0.24
GTF2A1P52655 MYC-209ENST00000641252 345 ntBASIC16.57■□□□□ 0.24
GTF2A1P52655 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
GTF2A1P52655 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms