Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HCFC1P51610 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.6□□□□□ -0.07
HCFC1P51610 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HCFC1P51610 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.6□□□□□ -0.07
HCFC1P51610 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.6□□□□□ -0.07
HCFC1P51610 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.6□□□□□ -0.07
HCFC1P51610 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.6□□□□□ -0.07
HCFC1P51610 IGHV3-71-201ENST00000523324 359 ntBASIC14.6□□□□□ -0.07
HCFC1P51610 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.6□□□□□ -0.07
HCFC1P51610 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.6□□□□□ -0.07
HCFC1P51610 AC091167.2-201ENST00000579581 588 ntBASIC14.6□□□□□ -0.07
HCFC1P51610 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.6□□□□□ -0.07
HCFC1P51610 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HCFC1P51610 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HCFC1P51610 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HCFC1P51610 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.6□□□□□ -0.07
HCFC1P51610 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.6□□□□□ -0.07
HCFC1P51610 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCFC1P51610 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.6□□□□□ -0.07
HCFC1P51610 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.59□□□□□ -0.07
HCFC1P51610 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.59□□□□□ -0.07
HCFC1P51610 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.59□□□□□ -0.07
HCFC1P51610 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.59□□□□□ -0.07
HCFC1P51610 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 AL138918.1-201ENST00000568306 659 ntBASIC14.59□□□□□ -0.07
HCFC1P51610 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.59□□□□□ -0.07
HCFC1P51610 AC007967.4-201ENST00000614700 386 ntBASIC14.59□□□□□ -0.07
HCFC1P51610 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.59□□□□□ -0.07
HCFC1P51610 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.59□□□□□ -0.07
HCFC1P51610 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HCFC1P51610 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HCFC1P51610 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 MIR346-201ENST00000362234 95 ntBASIC14.59□□□□□ -0.07
HCFC1P51610 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.59□□□□□ -0.07
HCFC1P51610 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 AC142381.1-201ENST00000426099 345 ntBASIC14.59□□□□□ -0.07
HCFC1P51610 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.59□□□□□ -0.07
HCFC1P51610 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.59□□□□□ -0.07
HCFC1P51610 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.59□□□□□ -0.07
HCFC1P51610 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 AC073389.1-201ENST00000595595 795 ntBASIC14.59□□□□□ -0.07
HCFC1P51610 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.59□□□□□ -0.07
HCFC1P51610 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.59□□□□□ -0.07
HCFC1P51610 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HCFC1P51610 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
HCFC1P51610 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCFC1P51610 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.58□□□□□ -0.07
HCFC1P51610 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HCFC1P51610 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.58□□□□□ -0.07
HCFC1P51610 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
HCFC1P51610 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.58□□□□□ -0.07
HCFC1P51610 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
HCFC1P51610 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.58□□□□□ -0.07
HCFC1P51610 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.58□□□□□ -0.08
HCFC1P51610 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.58□□□□□ -0.08
HCFC1P51610 BANF1P1-201ENST00000553684 263 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms