Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASP4P49662 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASP4P49662 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CASP4P49662 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASP4P49662 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CASP4P49662 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASP4P49662 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CASP4P49662 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASP4P49662 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 AL662844.4-201ENST00000606367 2838 ntBASIC18.37■□□□□ 0.53
CASP4P49662 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.37■□□□□ 0.53
CASP4P49662 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.37■□□□□ 0.53
CASP4P49662 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CASP4P49662 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.37■□□□□ 0.53
CASP4P49662 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.37■□□□□ 0.53
CASP4P49662 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.37■□□□□ 0.53
CASP4P49662 AC034105.1-201ENST00000563488 319 ntBASIC18.37■□□□□ 0.53
CASP4P49662 Z83851.2-201ENST00000609564 659 ntBASIC18.37■□□□□ 0.53
CASP4P49662 ACTL9-202ENST00000612068 1252 ntBASIC18.37■□□□□ 0.53
CASP4P49662 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.37■□□□□ 0.53
CASP4P49662 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CASP4P49662 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CASP4P49662 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP4P49662 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.37■□□□□ 0.53
CASP4P49662 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.37■□□□□ 0.53
CASP4P49662 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.36■□□□□ 0.53
CASP4P49662 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.36■□□□□ 0.53
CASP4P49662 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 IGLL3P-201ENST00000412472 434 ntBASIC18.36■□□□□ 0.53
CASP4P49662 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.36■□□□□ 0.53
CASP4P49662 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CASP4P49662 PCDH8P1-201ENST00000428983 2773 ntBASIC18.36■□□□□ 0.53
CASP4P49662 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.36■□□□□ 0.53
CASP4P49662 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CASP4P49662 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.36■□□□□ 0.53
CASP4P49662 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.36■□□□□ 0.53
CASP4P49662 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CASP4P49662 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.36■□□□□ 0.53
CASP4P49662 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.36■□□□□ 0.53
CASP4P49662 ALOX12P2-203ENST00000570921 1945 ntBASIC18.36■□□□□ 0.53
CASP4P49662 AC091167.2-201ENST00000579581 588 ntBASIC18.36■□□□□ 0.53
CASP4P49662 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.36■□□□□ 0.53
CASP4P49662 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CASP4P49662 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.36■□□□□ 0.53
CASP4P49662 AC010654.1-201ENST00000615722 808 ntBASIC18.36■□□□□ 0.53
CASP4P49662 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.36■□□□□ 0.53
CASP4P49662 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CASP4P49662 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.36■□□□□ 0.53
CASP4P49662 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP4P49662 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CASP4P49662 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.35■□□□□ 0.53
CASP4P49662 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
CASP4P49662 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.35■□□□□ 0.53
CASP4P49662 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CASP4P49662 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.35■□□□□ 0.53
CASP4P49662 AC006538.1-201ENST00000567905 1585 ntBASIC18.35■□□□□ 0.53
CASP4P49662 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.35■□□□□ 0.53
CASP4P49662 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CASP4P49662 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CASP4P49662 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.35■□□□□ 0.53
CASP4P49662 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.35■□□□□ 0.53
CASP4P49662 BX640515.1-201ENST00000617215 977 ntBASIC18.35■□□□□ 0.53
CASP4P49662 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.35■□□□□ 0.53
CASP4P49662 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.35■□□□□ 0.53
CASP4P49662 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP4P49662 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP4P49662 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms