Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
CHRNA4P43681 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CHRNA4P43681 MRPL20P1-201ENST00000400819 433 ntBASIC17.02■□□□□ 0.32
CHRNA4P43681 AC009947.1-201ENST00000444350 727 ntBASIC17.02■□□□□ 0.32
CHRNA4P43681 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRNA4P43681 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA4P43681 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA4P43681 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA4P43681 MPDU1-223ENST00000582151 728 ntBASIC17.02■□□□□ 0.32
CHRNA4P43681 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA4P43681 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRNA4P43681 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA4P43681 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA4P43681 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA4P43681 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA4P43681 OR6D1P-203ENST00000641209 4860 ntBASIC17.02■□□□□ 0.31
CHRNA4P43681 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CHRNA4P43681 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA4P43681 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA4P43681 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA4P43681 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA4P43681 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.02■□□□□ 0.31
CHRNA4P43681 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA4P43681 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA4P43681 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA4P43681 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA4P43681 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 AL671710.1-201ENST00000610245 2349 ntBASIC17.01■□□□□ 0.31
CHRNA4P43681 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA4P43681 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRNA4P43681 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA4P43681 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CHRNA4P43681 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 AP002490.2-201ENST00000524791 560 ntBASIC17.01■□□□□ 0.31
CHRNA4P43681 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 MIR4751-201ENST00000578027 74 ntBASIC17.01■□□□□ 0.31
CHRNA4P43681 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA4P43681 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CHRNA4P43681 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHRNA4P43681 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHRNA4P43681 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA4P43681 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA4P43681 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA4P43681 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA4P43681 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA4P43681 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA4P43681 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA4P43681 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CHRNA4P43681 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CHRNA4P43681 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 MIR4492-201ENST00000581627 80 ntBASIC17■□□□□ 0.31
CHRNA4P43681 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHRNA4P43681 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA4P43681 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA4P43681 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA4P43681 SNX33P1-201ENST00000592116 1762 ntBASIC17■□□□□ 0.31
CHRNA4P43681 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHRNA4P43681 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHRNA4P43681 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.99■□□□□ 0.31
CHRNA4P43681 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
CHRNA4P43681 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms