Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HLA-H-201ENST00000383620 1096 ntBASIC21.18■□□□□ 0.98
COL15A1P39059 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.18■□□□□ 0.98
COL15A1P39059 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.18■□□□□ 0.98
COL15A1P39059 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.18■□□□□ 0.98
COL15A1P39059 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.18■□□□□ 0.98
COL15A1P39059 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.18■□□□□ 0.98
COL15A1P39059 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 AC004233.3-201ENST00000607794 1269 ntBASIC21.18■□□□□ 0.98
COL15A1P39059 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
COL15A1P39059 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.18■□□□□ 0.98
COL15A1P39059 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
COL15A1P39059 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COL15A1P39059 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.17■□□□□ 0.98
COL15A1P39059 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.17■□□□□ 0.98
COL15A1P39059 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 AL023806.1-201ENST00000603994 1649 ntBASIC21.17■□□□□ 0.98
COL15A1P39059 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
COL15A1P39059 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.17■□□□□ 0.98
COL15A1P39059 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 OR8S1-201ENST00000310194 1080 ntBASIC21.17■□□□□ 0.98
COL15A1P39059 NME2P1-201ENST00000426182 414 ntBASIC21.17■□□□□ 0.98
COL15A1P39059 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
COL15A1P39059 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.17■□□□□ 0.98
COL15A1P39059 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.17■□□□□ 0.98
COL15A1P39059 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.17■□□□□ 0.98
COL15A1P39059 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.17■□□□□ 0.98
COL15A1P39059 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL15A1P39059 AC141586.5-201ENST00000624546 2050 ntBASIC21.17■□□□□ 0.98
COL15A1P39059 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
COL15A1P39059 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.16■□□□□ 0.98
COL15A1P39059 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COL15A1P39059 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.16■□□□□ 0.98
COL15A1P39059 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
COL15A1P39059 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.16■□□□□ 0.98
COL15A1P39059 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.16■□□□□ 0.98
COL15A1P39059 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.16■□□□□ 0.98
COL15A1P39059 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.16■□□□□ 0.98
COL15A1P39059 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.16■□□□□ 0.98
COL15A1P39059 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.16■□□□□ 0.98
COL15A1P39059 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL15A1P39059 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.16■□□□□ 0.98
COL15A1P39059 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
COL15A1P39059 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.15■□□□□ 0.98
COL15A1P39059 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL15A1P39059 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL15A1P39059 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.15■□□□□ 0.98
COL15A1P39059 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
COL15A1P39059 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.15■□□□□ 0.98
COL15A1P39059 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.15■□□□□ 0.98
COL15A1P39059 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.15■□□□□ 0.98
COL15A1P39059 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.15■□□□□ 0.98
COL15A1P39059 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL15A1P39059 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL15A1P39059 TEX28P1-201ENST00000613479 1221 ntBASIC21.15■□□□□ 0.98
COL15A1P39059 TEX28P2-201ENST00000617764 1221 ntBASIC21.15■□□□□ 0.98
COL15A1P39059 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.15■□□□□ 0.98
COL15A1P39059 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL15A1P39059 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL15A1P39059 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.15■□□□□ 0.98
COL15A1P39059 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
COL15A1P39059 AC026471.1-201ENST00000564629 3026 ntBASIC21.15■□□□□ 0.98
COL15A1P39059 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL15A1P39059 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.15■□□□□ 0.98
COL15A1P39059 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.15■□□□□ 0.98
COL15A1P39059 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL15A1P39059 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.14■□□□□ 0.98
COL15A1P39059 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL15A1P39059 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL15A1P39059 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
COL15A1P39059 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms