Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CLCN1P35523 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCN1P35523 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCN1P35523 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLCN1P35523 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CLCN1P35523 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCN1P35523 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.23■□□□□ 0.67
CLCN1P35523 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCN1P35523 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCN1P35523 SPDYE13P-201ENST00000445314 798 ntBASIC19.23■□□□□ 0.67
CLCN1P35523 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.23■□□□□ 0.67
CLCN1P35523 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.23■□□□□ 0.67
CLCN1P35523 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.23■□□□□ 0.67
CLCN1P35523 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.23■□□□□ 0.67
CLCN1P35523 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CLCN1P35523 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLCN1P35523 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCN1P35523 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCN1P35523 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCN1P35523 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCN1P35523 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLCN1P35523 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCN1P35523 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 AC006538.1-201ENST00000567905 1585 ntBASIC19.23■□□□□ 0.67
CLCN1P35523 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCN1P35523 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN1P35523 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCN1P35523 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCN1P35523 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCN1P35523 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCN1P35523 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.22■□□□□ 0.67
CLCN1P35523 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.22■□□□□ 0.67
CLCN1P35523 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLCN1P35523 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCN1P35523 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCN1P35523 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CLCN1P35523 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCN1P35523 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLCN1P35523 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCN1P35523 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCN1P35523 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN1P35523 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC19.21■□□□□ 0.67
CLCN1P35523 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN1P35523 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN1P35523 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN1P35523 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLCN1P35523 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN1P35523 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
CLCN1P35523 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLCN1P35523 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN1P35523 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLCN1P35523 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN1P35523 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN1P35523 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN1P35523 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLCN1P35523 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN1P35523 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.21■□□□□ 0.67
CLCN1P35523 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN1P35523 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.21■□□□□ 0.67
CLCN1P35523 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.21■□□□□ 0.67
CLCN1P35523 DUX4L26-201ENST00000489078 1255 ntBASIC19.21■□□□□ 0.67
CLCN1P35523 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN1P35523 VENTXP5-201ENST00000523979 775 ntBASIC19.21■□□□□ 0.67
CLCN1P35523 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN1P35523 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms