Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.47■□□□□ 0.23
EPHA3P29320 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.47■□□□□ 0.23
EPHA3P29320 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.46■□□□□ 0.23
EPHA3P29320 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.46■□□□□ 0.23
EPHA3P29320 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
EPHA3P29320 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
EPHA3P29320 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.46■□□□□ 0.23
EPHA3P29320 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
EPHA3P29320 LINC00895-201ENST00000629028 1637 ntBASIC16.46■□□□□ 0.23
EPHA3P29320 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
EPHA3P29320 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
EPHA3P29320 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 AC246785.2-201ENST00000432512 513 ntBASIC16.46■□□□□ 0.23
EPHA3P29320 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.46■□□□□ 0.23
EPHA3P29320 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.46■□□□□ 0.23
EPHA3P29320 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.46■□□□□ 0.23
EPHA3P29320 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.46■□□□□ 0.23
EPHA3P29320 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.46■□□□□ 0.23
EPHA3P29320 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.46■□□□□ 0.23
EPHA3P29320 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.46■□□□□ 0.23
EPHA3P29320 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.46■□□□□ 0.23
EPHA3P29320 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
EPHA3P29320 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPHA3P29320 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.46■□□□□ 0.22
EPHA3P29320 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
EPHA3P29320 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
EPHA3P29320 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
EPHA3P29320 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
EPHA3P29320 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.45■□□□□ 0.22
EPHA3P29320 AC148477.5-201ENST00000625164 1645 ntBASIC16.45■□□□□ 0.22
EPHA3P29320 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.45■□□□□ 0.22
EPHA3P29320 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 NUS1P1-201ENST00000446295 882 ntBASIC16.45■□□□□ 0.22
EPHA3P29320 HLA-J-202ENST00000469281 1241 ntBASIC16.45■□□□□ 0.22
EPHA3P29320 AC063952.2-201ENST00000498792 1227 ntBASIC16.45■□□□□ 0.22
EPHA3P29320 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.45■□□□□ 0.22
EPHA3P29320 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.45■□□□□ 0.22
EPHA3P29320 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.45■□□□□ 0.22
EPHA3P29320 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
EPHA3P29320 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
EPHA3P29320 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EPHA3P29320 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms