Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
VARSP26640 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.66■□□□□ 0.26
VARSP26640 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 PMS2P7-201ENST00000506558 1336 ntBASIC16.66■□□□□ 0.26
VARSP26640 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.66■□□□□ 0.26
VARSP26640 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.66■□□□□ 0.26
VARSP26640 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VARSP26640 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
VARSP26640 AC097637.2-201ENST00000624096 1997 ntBASIC16.66■□□□□ 0.26
VARSP26640 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARSP26640 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
VARSP26640 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.65■□□□□ 0.26
VARSP26640 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.65■□□□□ 0.26
VARSP26640 ZNF259P1-201ENST00000407656 1365 ntBASIC16.65■□□□□ 0.26
VARSP26640 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
VARSP26640 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
VARSP26640 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.65■□□□□ 0.26
VARSP26640 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 LINC02199-201ENST00000506655 2702 ntBASIC16.65■□□□□ 0.26
VARSP26640 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.65■□□□□ 0.26
VARSP26640 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
VARSP26640 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.65■□□□□ 0.26
VARSP26640 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 RBM17P3-201ENST00000417687 1192 ntBASIC16.65■□□□□ 0.26
VARSP26640 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.65■□□□□ 0.26
VARSP26640 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.65■□□□□ 0.26
VARSP26640 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.65■□□□□ 0.26
VARSP26640 NKAPP1-205ENST00000585790 367 ntBASIC16.65■□□□□ 0.26
VARSP26640 AL671883.3-201ENST00000603274 991 ntBASIC16.65■□□□□ 0.26
VARSP26640 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VARSP26640 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
VARSP26640 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.65■□□□□ 0.26
VARSP26640 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.65■□□□□ 0.26
VARSP26640 AC023824.1-201ENST00000562945 2975 ntBASIC16.65■□□□□ 0.26
VARSP26640 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARSP26640 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VARSP26640 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
VARSP26640 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.64■□□□□ 0.25
VARSP26640 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.64■□□□□ 0.25
VARSP26640 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VARSP26640 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.64■□□□□ 0.25
VARSP26640 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.64■□□□□ 0.25
VARSP26640 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms