Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TNFSF4P23510 PP12613-201ENST00000424958 2230 ntBASIC14.45□□□□□ -0.1
TNFSF4P23510 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFSF4P23510 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TNFSF4P23510 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.45□□□□□ -0.1
TNFSF4P23510 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
TNFSF4P23510 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFSF4P23510 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFSF4P23510 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.45□□□□□ -0.1
TNFSF4P23510 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFSF4P23510 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
TNFSF4P23510 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFSF4P23510 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TNFSF4P23510 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 MIR940-201ENST00000401276 94 ntBASIC14.44□□□□□ -0.1
TNFSF4P23510 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.44□□□□□ -0.1
TNFSF4P23510 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 KRT18P3-201ENST00000451602 1288 ntBASIC14.44□□□□□ -0.1
TNFSF4P23510 AP002490.2-201ENST00000524791 560 ntBASIC14.44□□□□□ -0.1
TNFSF4P23510 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFSF4P23510 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 FRMD8P1-201ENST00000440433 1524 ntBASIC14.44□□□□□ -0.1
TNFSF4P23510 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFSF4P23510 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TNFSF4P23510 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFSF4P23510 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
TNFSF4P23510 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFSF4P23510 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFSF4P23510 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFSF4P23510 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFSF4P23510 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.43□□□□□ -0.1
TNFSF4P23510 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
TNFSF4P23510 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 AC007967.2-201ENST00000432613 625 ntBASIC14.43□□□□□ -0.1
TNFSF4P23510 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.43□□□□□ -0.1
TNFSF4P23510 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms