Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
RAB4AP20338 AL023875.1-201ENST00000640777 796 ntBASIC12.99□□□□□ -0.33
RAB4AP20338 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAB4AP20338 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB4AP20338 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAB4AP20338 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB4AP20338 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB4AP20338 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB4AP20338 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB4AP20338 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAB4AP20338 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB4AP20338 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
RAB4AP20338 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RAB4AP20338 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 AC079781.5-202ENST00000641784 3743 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB4AP20338 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB4AP20338 AL024508.2-201ENST00000607749 1894 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 AC022898.2-201ENST00000616822 1312 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.98□□□□□ -0.33
RAB4AP20338 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.98□□□□□ -0.33
RAB4AP20338 AC239809.2-201ENST00000415381 517 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB4AP20338 AC069544.1-201ENST00000609399 999 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 AL353708.3-201ENST00000610272 989 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 AL031985.4-201ENST00000642138 673 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB4AP20338 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RAB4AP20338 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.98□□□□□ -0.33
RAB4AP20338 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB4AP20338 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB4AP20338 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 CICP20-201ENST00000443330 2801 ntBASIC12.98□□□□□ -0.33
RAB4AP20338 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB4AP20338 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAB4AP20338 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB4AP20338 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB4AP20338 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAB4AP20338 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB4AP20338 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms