Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCL4P13236 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL4P13236 CROCCP2-202ENST00000412962 2773 ntBASIC15.82■□□□□ 0.12
CCL4P13236 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL4P13236 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCL4P13236 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCL4P13236 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL4P13236 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL4P13236 MRPS18AP1-201ENST00000414458 589 ntBASIC15.82■□□□□ 0.12
CCL4P13236 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL4P13236 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL4P13236 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.82■□□□□ 0.12
CCL4P13236 SERBP1P5-201ENST00000510079 1181 ntBASIC15.82■□□□□ 0.12
CCL4P13236 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL4P13236 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.82■□□□□ 0.12
CCL4P13236 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.82■□□□□ 0.12
CCL4P13236 AC073389.1-201ENST00000595595 795 ntBASIC15.82■□□□□ 0.12
CCL4P13236 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 AL590560.3-201ENST00000623350 461 ntBASIC15.82■□□□□ 0.12
CCL4P13236 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 AC100757.3-201ENST00000622361 1406 ntBASIC15.82■□□□□ 0.12
CCL4P13236 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL4P13236 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL4P13236 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL4P13236 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CCL4P13236 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCL4P13236 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL4P13236 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCL4P13236 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL4P13236 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCL4P13236 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL4P13236 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.81■□□□□ 0.12
CCL4P13236 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCL4P13236 FOXO1B-201ENST00000504678 1527 ntBASIC15.81■□□□□ 0.12
CCL4P13236 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.81■□□□□ 0.12
CCL4P13236 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL4P13236 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 AC005225.4-201ENST00000557330 545 ntBASIC15.81■□□□□ 0.12
CCL4P13236 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.81■□□□□ 0.12
CCL4P13236 AC092053.1-201ENST00000605787 1936 ntBASIC15.81■□□□□ 0.12
CCL4P13236 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 AC063926.2-201ENST00000623766 1308 ntBASIC15.81■□□□□ 0.12
CCL4P13236 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCL4P13236 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL4P13236 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL4P13236 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL4P13236 AL671710.1-201ENST00000610245 2349 ntBASIC15.8■□□□□ 0.12
CCL4P13236 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL4P13236 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL4P13236 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCL4P13236 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL4P13236 LINC02012-201ENST00000608206 1725 ntBASIC15.8■□□□□ 0.12
CCL4P13236 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL4P13236 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL4P13236 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL4P13236 AC090340.1-201ENST00000620778 4980 ntBASIC15.8■□□□□ 0.12
CCL4P13236 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL4P13236 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL4P13236 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL4P13236 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCL4P13236 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL4P13236 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL4P13236 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms