Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBCP0CG48 NSUN5P1-202ENST00000421140 1535 ntBASIC14.86□□□□□ -0.03
UBCP0CG48 NSUN5P2-203ENST00000457352 1529 ntBASIC14.86□□□□□ -0.03
UBCP0CG48 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 AL645728.1-201ENST00000366221 2101 ntBASIC14.86□□□□□ -0.03
UBCP0CG48 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBCP0CG48 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.85□□□□□ -0.03
UBCP0CG48 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.85□□□□□ -0.03
UBCP0CG48 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.85□□□□□ -0.03
UBCP0CG48 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.85□□□□□ -0.03
UBCP0CG48 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
UBCP0CG48 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.85□□□□□ -0.03
UBCP0CG48 SPDYE21P-201ENST00000413323 827 ntBASIC14.85□□□□□ -0.03
UBCP0CG48 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 HLA-J-202ENST00000469281 1241 ntBASIC14.85□□□□□ -0.03
UBCP0CG48 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.85□□□□□ -0.03
UBCP0CG48 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.85□□□□□ -0.03
UBCP0CG48 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
UBCP0CG48 BNIP3P18-201ENST00000593976 575 ntBASIC14.85□□□□□ -0.03
UBCP0CG48 AC114341.1-201ENST00000618070 349 ntBASIC14.85□□□□□ -0.03
UBCP0CG48 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
UBCP0CG48 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBCP0CG48 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.85□□□□□ -0.03
UBCP0CG48 AC092850.2-201ENST00000623821 2697 ntBASIC14.85□□□□□ -0.03
UBCP0CG48 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.85□□□□□ -0.03
UBCP0CG48 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.85□□□□□ -0.03
UBCP0CG48 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
UBCP0CG48 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBCP0CG48 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 AC148477.5-201ENST00000625164 1645 ntBASIC14.84□□□□□ -0.03
UBCP0CG48 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.84□□□□□ -0.03
UBCP0CG48 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
UBCP0CG48 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
UBCP0CG48 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
UBCP0CG48 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
UBCP0CG48 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 TOB2P1-201ENST00000469761 992 ntBASIC14.84□□□□□ -0.03
UBCP0CG48 TPSP2-201ENST00000561760 610 ntBASIC14.84□□□□□ -0.03
UBCP0CG48 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
UBCP0CG48 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
UBCP0CG48 AP000867.4-201ENST00000641616 219 ntBASIC14.84□□□□□ -0.03
UBCP0CG48 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.84□□□□□ -0.03
UBCP0CG48 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.84□□□□□ -0.03
UBCP0CG48 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.84□□□□□ -0.03
UBCP0CG48 LINC00895-201ENST00000629028 1637 ntBASIC14.84□□□□□ -0.03
UBCP0CG48 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBCP0CG48 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.84□□□□□ -0.03
UBCP0CG48 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.84□□□□□ -0.03
UBCP0CG48 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms