Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.48■□□□□ 0.39
CD48P09326 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CD48P09326 MRPL3P1-201ENST00000400109 1033 ntBASIC17.48■□□□□ 0.39
CD48P09326 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 PMS2P1-201ENST00000431037 1228 ntBASIC17.48■□□□□ 0.39
CD48P09326 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.48■□□□□ 0.39
CD48P09326 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.48■□□□□ 0.39
CD48P09326 AC008667.4-201ENST00000607370 168 ntBASIC17.48■□□□□ 0.39
CD48P09326 MIR7706-201ENST00000613747 67 ntBASIC17.48■□□□□ 0.39
CD48P09326 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.48■□□□□ 0.39
CD48P09326 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.48■□□□□ 0.39
CD48P09326 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CD48P09326 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.48■□□□□ 0.39
CD48P09326 AC006538.1-201ENST00000567905 1585 ntBASIC17.48■□□□□ 0.39
CD48P09326 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CD48P09326 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CD48P09326 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CD48P09326 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.48■□□□□ 0.39
CD48P09326 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 AC006449.5-201ENST00000610658 2098 ntBASIC17.48■□□□□ 0.39
CD48P09326 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.47■□□□□ 0.39
CD48P09326 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.47■□□□□ 0.39
CD48P09326 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.47■□□□□ 0.39
CD48P09326 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.47■□□□□ 0.39
CD48P09326 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CD48P09326 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 IGHV3-65-201ENST00000523210 341 ntBASIC17.47■□□□□ 0.39
CD48P09326 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.47■□□□□ 0.39
CD48P09326 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.47■□□□□ 0.39
CD48P09326 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.47■□□□□ 0.39
CD48P09326 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.47■□□□□ 0.39
CD48P09326 MIR4492-201ENST00000581627 80 ntBASIC17.47■□□□□ 0.39
CD48P09326 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CD48P09326 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.47■□□□□ 0.39
CD48P09326 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CD48P09326 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.47■□□□□ 0.39
CD48P09326 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CD48P09326 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.47■□□□□ 0.39
CD48P09326 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.47■□□□□ 0.39
CD48P09326 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.47■□□□□ 0.39
CD48P09326 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
CD48P09326 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD48P09326 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.46■□□□□ 0.39
CD48P09326 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.46■□□□□ 0.39
CD48P09326 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.46■□□□□ 0.39
CD48P09326 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.46■□□□□ 0.39
CD48P09326 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.46■□□□□ 0.39
CD48P09326 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.46■□□□□ 0.39
CD48P09326 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.46■□□□□ 0.39
CD48P09326 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.46■□□□□ 0.39
CD48P09326 AL160237.2-201ENST00000556165 472 ntBASIC17.46■□□□□ 0.39
CD48P09326 OR7E47P-204ENST00000575924 449 ntBASIC17.46■□□□□ 0.39
CD48P09326 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.46■□□□□ 0.39
CD48P09326 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.46■□□□□ 0.39
CD48P09326 AC117500.6-201ENST00000624871 588 ntBASIC17.46■□□□□ 0.39
CD48P09326 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CD48P09326 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CD48P09326 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD48P09326 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms