Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
APPP05067 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
APPP05067 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
APPP05067 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 AC002347.1-201ENST00000569543 541 ntBASIC20.23■□□□□ 0.83
APPP05067 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 KRT8P49-201ENST00000604166 1432 ntBASIC20.23■□□□□ 0.83
APPP05067 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.23■□□□□ 0.83
APPP05067 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 AC080080.1-201ENST00000625121 2420 ntBASIC20.23■□□□□ 0.83
APPP05067 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
APPP05067 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.22■□□□□ 0.83
APPP05067 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
APPP05067 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.22■□□□□ 0.83
APPP05067 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.22■□□□□ 0.83
APPP05067 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
APPP05067 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
APPP05067 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
APPP05067 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
APPP05067 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.22■□□□□ 0.83
APPP05067 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.22■□□□□ 0.83
APPP05067 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
APPP05067 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.22■□□□□ 0.83
APPP05067 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
APPP05067 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.22■□□□□ 0.83
APPP05067 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.22■□□□□ 0.83
APPP05067 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
APPP05067 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.22■□□□□ 0.83
APPP05067 KRT19P2-202ENST00000557173 1012 ntBASIC20.22■□□□□ 0.83
APPP05067 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
APPP05067 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
APPP05067 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.22■□□□□ 0.83
APPP05067 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
APPP05067 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.22■□□□□ 0.83
APPP05067 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
APPP05067 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
APPP05067 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.22■□□□□ 0.83
APPP05067 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APPP05067 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
APPP05067 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
APPP05067 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
APPP05067 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.21■□□□□ 0.83
APPP05067 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.21■□□□□ 0.83
APPP05067 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.21■□□□□ 0.83
APPP05067 BX842568.4-201ENST00000421222 227 ntBASIC20.21■□□□□ 0.83
APPP05067 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.21■□□□□ 0.83
APPP05067 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.21■□□□□ 0.83
APPP05067 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.21■□□□□ 0.83
APPP05067 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.21■□□□□ 0.83
APPP05067 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.21■□□□□ 0.83
APPP05067 TUBB8P12-201ENST00000308911 1335 ntBASIC20.21■□□□□ 0.83
APPP05067 TUBB7P-202ENST00000428444 1305 ntBASIC20.21■□□□□ 0.83
APPP05067 TUBB8P7-204ENST00000567960 1332 ntBASIC20.21■□□□□ 0.83
APPP05067 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APPP05067 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APPP05067 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APPP05067 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
APPP05067 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.2■□□□□ 0.82
APPP05067 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
APPP05067 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
APPP05067 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms