Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TOMM40O96008 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TOMM40O96008 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TOMM40O96008 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TOMM40O96008 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TOMM40O96008 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.27□□□□□ -0.28
TOMM40O96008 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TOMM40O96008 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TOMM40O96008 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.27□□□□□ -0.28
TOMM40O96008 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TOMM40O96008 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.27□□□□□ -0.28
TOMM40O96008 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.27□□□□□ -0.28
TOMM40O96008 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TOMM40O96008 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
TOMM40O96008 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TOMM40O96008 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TOMM40O96008 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.27□□□□□ -0.29
TOMM40O96008 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.27□□□□□ -0.29
TOMM40O96008 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.27□□□□□ -0.29
TOMM40O96008 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TOMM40O96008 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.27□□□□□ -0.29
TOMM40O96008 IGHV3-47-201ENST00000425060 335 ntBASIC13.27□□□□□ -0.29
TOMM40O96008 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.27□□□□□ -0.29
TOMM40O96008 AP002383.4-201ENST00000442518 975 ntBASIC13.27□□□□□ -0.29
TOMM40O96008 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.27□□□□□ -0.29
TOMM40O96008 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.27□□□□□ -0.29
TOMM40O96008 AP000867.4-201ENST00000641616 219 ntBASIC13.27□□□□□ -0.29
TOMM40O96008 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
TOMM40O96008 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TOMM40O96008 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TOMM40O96008 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TOMM40O96008 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TOMM40O96008 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
TOMM40O96008 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
TOMM40O96008 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
TOMM40O96008 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TOMM40O96008 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TOMM40O96008 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.26□□□□□ -0.29
TOMM40O96008 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 SPDYE21P-201ENST00000413323 827 ntBASIC13.26□□□□□ -0.29
TOMM40O96008 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TOMM40O96008 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 NUS1P1-201ENST00000446295 882 ntBASIC13.26□□□□□ -0.29
TOMM40O96008 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
TOMM40O96008 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 AC074051.2-201ENST00000565115 352 ntBASIC13.26□□□□□ -0.29
TOMM40O96008 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TOMM40O96008 AC087388.1-201ENST00000571370 1112 ntBASIC13.26□□□□□ -0.29
TOMM40O96008 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.26□□□□□ -0.29
TOMM40O96008 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.26□□□□□ -0.29
TOMM40O96008 AC006449.5-201ENST00000610658 2098 ntBASIC13.26□□□□□ -0.29
TOMM40O96008 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.26□□□□□ -0.29
TOMM40O96008 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.26□□□□□ -0.29
TOMM40O96008 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TOMM40O96008 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.26□□□□□ -0.29
TOMM40O96008 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TOMM40O96008 CYP2T1P-202ENST00000641596 2535 ntBASIC13.26□□□□□ -0.29
TOMM40O96008 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TOMM40O96008 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TOMM40O96008 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TOMM40O96008 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms