Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.39■□□□□ 0.69
MBD3O95983 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD3O95983 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD3O95983 AC013467.2-201ENST00000605472 835 ntBASIC19.39■□□□□ 0.69
MBD3O95983 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3O95983 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3O95983 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MBD3O95983 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3O95983 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
MBD3O95983 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3O95983 GGT3P-204ENST00000453783 1664 ntBASIC19.39■□□□□ 0.69
MBD3O95983 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3O95983 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
MBD3O95983 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3O95983 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MBD3O95983 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
MBD3O95983 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD3O95983 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
MBD3O95983 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
MBD3O95983 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD3O95983 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD3O95983 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.38■□□□□ 0.69
MBD3O95983 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.38■□□□□ 0.69
MBD3O95983 GUSBP12-201ENST00000513727 720 ntBASIC19.38■□□□□ 0.69
MBD3O95983 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
MBD3O95983 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD3O95983 AC023824.1-201ENST00000562945 2975 ntBASIC19.38■□□□□ 0.69
MBD3O95983 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.38■□□□□ 0.69
MBD3O95983 RNF126P1-202ENST00000569893 925 ntBASIC19.38■□□□□ 0.69
MBD3O95983 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 AC005336.2-201ENST00000593183 939 ntBASIC19.38■□□□□ 0.69
MBD3O95983 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD3O95983 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MBD3O95983 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MBD3O95983 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.38■□□□□ 0.69
MBD3O95983 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3O95983 AC092850.2-201ENST00000623821 2697 ntBASIC19.38■□□□□ 0.69
MBD3O95983 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MBD3O95983 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.37■□□□□ 0.69
MBD3O95983 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.37■□□□□ 0.69
MBD3O95983 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MBD3O95983 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.37■□□□□ 0.69
MBD3O95983 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.37■□□□□ 0.69
MBD3O95983 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.37■□□□□ 0.69
MBD3O95983 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
MBD3O95983 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.37■□□□□ 0.69
MBD3O95983 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.37■□□□□ 0.69
MBD3O95983 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.37■□□□□ 0.69
MBD3O95983 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.37■□□□□ 0.69
MBD3O95983 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MBD3O95983 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD3O95983 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.37■□□□□ 0.69
MBD3O95983 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
MBD3O95983 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 AC010491.1-201ENST00000563101 2797 ntBASIC19.37■□□□□ 0.69
MBD3O95983 GGT4P-201ENST00000623672 1708 ntBASIC19.37■□□□□ 0.69
MBD3O95983 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MBD3O95983 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3O95983 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.36■□□□□ 0.69
MBD3O95983 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms