Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC24.89■■□□□ 1.57
RAPGEF3O95398 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
RAPGEF3O95398 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC24.89■■□□□ 1.57
RAPGEF3O95398 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC24.89■■□□□ 1.57
RAPGEF3O95398 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF3O95398 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF3O95398 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF3O95398 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF3O95398 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF3O95398 AL671710.1-201ENST00000610245 2349 ntBASIC24.88■■□□□ 1.57
RAPGEF3O95398 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF3O95398 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF3O95398 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF3O95398 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
RAPGEF3O95398 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF3O95398 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF3O95398 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF3O95398 RNA5SP423-201ENST00000517127 109 ntBASIC24.87■■□□□ 1.57
RAPGEF3O95398 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 AGER-214ENST00000538695 487 ntTSL 2 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF3O95398 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF3O95398 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC24.87■■□□□ 1.57
RAPGEF3O95398 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF3O95398 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF3O95398 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF3O95398 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF3O95398 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF3O95398 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF3O95398 LBX2-201ENST00000341396 886 ntTSL 3 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF3O95398 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF3O95398 AC007551.1-201ENST00000457394 519 ntBASIC24.86■■□□□ 1.57
RAPGEF3O95398 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF3O95398 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC24.86■■□□□ 1.57
RAPGEF3O95398 AL355312.1-201ENST00000407115 2176 ntBASIC24.86■■□□□ 1.57
RAPGEF3O95398 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF3O95398 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF3O95398 AL021920.2-201ENST00000624828 1351 ntBASIC24.85■■□□□ 1.57
RAPGEF3O95398 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF3O95398 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 APOC3-202ENST00000375345 604 ntTSL 5 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 USB1-202ENST00000423271 1217 ntTSL 2 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 RHOA-206ENST00000454011 889 ntTSL 2 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 EMC4-209ENST00000559421 497 ntTSL 2 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC24.85■■□□□ 1.57
RAPGEF3O95398 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RAPGEF3O95398 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 MIR1247-201ENST00000408206 136 ntBASIC24.84■■□□□ 1.57
RAPGEF3O95398 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC24.84■■□□□ 1.57
RAPGEF3O95398 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC24.84■■□□□ 1.57
RAPGEF3O95398 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC24.84■■□□□ 1.57
RAPGEF3O95398 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC24.84■■□□□ 1.57
RAPGEF3O95398 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF3O95398 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
RAPGEF3O95398 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms