Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NKX2-2O95096 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.55■□□□□ 0.08
NKX2-2O95096 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 CRYGEP-201ENST00000412192 528 ntBASIC15.55■□□□□ 0.08
NKX2-2O95096 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.55■□□□□ 0.08
NKX2-2O95096 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.55■□□□□ 0.08
NKX2-2O95096 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.55■□□□□ 0.08
NKX2-2O95096 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 Z83851.2-201ENST00000609564 659 ntBASIC15.55■□□□□ 0.08
NKX2-2O95096 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.55■□□□□ 0.08
NKX2-2O95096 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.55■□□□□ 0.08
NKX2-2O95096 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.55■□□□□ 0.08
NKX2-2O95096 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NKX2-2O95096 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.55■□□□□ 0.08
NKX2-2O95096 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NKX2-2O95096 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.54■□□□□ 0.08
NKX2-2O95096 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 AL671710.1-201ENST00000610245 2349 ntBASIC15.54■□□□□ 0.08
NKX2-2O95096 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.54■□□□□ 0.08
NKX2-2O95096 IGLL3P-201ENST00000412472 434 ntBASIC15.54■□□□□ 0.08
NKX2-2O95096 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NKX2-2O95096 HCG4B-203ENST00000450128 991 ntBASIC15.54■□□□□ 0.08
NKX2-2O95096 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
NKX2-2O95096 AC079776.4-201ENST00000511039 504 ntBASIC15.54■□□□□ 0.08
NKX2-2O95096 AC145285.3-201ENST00000564603 959 ntBASIC15.54■□□□□ 0.08
NKX2-2O95096 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.54■□□□□ 0.08
NKX2-2O95096 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.54■□□□□ 0.08
NKX2-2O95096 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.54■□□□□ 0.08
NKX2-2O95096 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 AL512652.2-201ENST00000625156 1716 ntBASIC15.54■□□□□ 0.08
NKX2-2O95096 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.54■□□□□ 0.08
NKX2-2O95096 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NKX2-2O95096 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NKX2-2O95096 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.54■□□□□ 0.08
NKX2-2O95096 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.53■□□□□ 0.08
NKX2-2O95096 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.53■□□□□ 0.08
NKX2-2O95096 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
NKX2-2O95096 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.53■□□□□ 0.08
NKX2-2O95096 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.53■□□□□ 0.08
NKX2-2O95096 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.53■□□□□ 0.08
NKX2-2O95096 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 MIR4515-201ENST00000584082 81 ntBASIC15.53■□□□□ 0.08
NKX2-2O95096 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.53■□□□□ 0.08
NKX2-2O95096 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.53■□□□□ 0.08
NKX2-2O95096 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms